Overview
Sponsor-declared trial summary
Methyl CpG binding protein 2 (MECP2) Duplication Syndrome (MDS)
To assess the safety and tolerability of ION440 (Part 1 and 2)
Key facts
- Sponsor
- Ionis Pharmaceuticals Inc.
- Participant type
- Pediatric, Patients
- Age range
- 0-17 years, 18-64 years, 65+ years
- Gender
- Male
- Therapeutic area
- Phenomena and Processes [G] - Genetic Phenomena [G05]
- Trial duration
- 24 Oct 2025 → ongoing
- Decision date (initial)
- 2025-07-14
- Transition trial
- No
- Low-intervention
- No
- Rare-disease indication
- Yes
- Vulnerable population
- Yes
- Funding sources
- Ionis Pharmaceuticals Inc
External identifiers
- EU CT number
- 2023-507192-22-00
- WHO UTN
- U1111-1303-4105
- ClinicalTrials.gov
- NCT06430385
Trial design
CTIS Part I — objectives, methods, condition coding
Main objective
Scope: Pharmacodynamic, Safety, Others, Pharmacokinetic
To assess the safety and tolerability of ION440 (Part 1 and 2)
Secondary objectives 1
- To characterize the pharmacokinetics of ION440 in the cerebrospinal fluid (CSF) and plasma (Part 1 and 2)
Conditions and MedDRA coding
Methyl CpG binding protein 2 (MECP2) Duplication Syndrome (MDS)
Eligibility criteria
Principal inclusion / exclusion criteria as submitted by sponsor
Inclusion criteria 7
- Part 1: Males aged ≥ 2 to ≤ 65 years, depending on specific cohort and group, at the time of informed consent. − Group A: ≥ 8 to ≤ 65 years − Group B: 2 to 7 years, inclusive
- Part 1: Participant has at least one parent or caregiver ≥ 18 years of age capable of providing informed consent (signed and dated) and able to attend all scheduled study visits and provide feedback regarding the participant’s symptoms and performance as described in the protocol, and able to comply with all study requirements and activities
- Part 1: Participant has a documented diagnosis of MDS, with genetic confirmation of MECP2 duplication.
- Part 1: Able to complete all study procedures, measurements and visits to support primary and secondary endpoints, and the caregiver/participant has adequately supportive psychosocial circumstances, in the opinion of the Investigator.
- Part 1: Is currently receiving stable doses of concomitant medications for at least 1 month prior to Screening.
- Part 2: Participants in ION440-CS1 Part 1/MAD who received at least one dose of Study Drug/Sham in Part 1/MAD, missed no more than 1 study visit, and attended the Followup visit (Visit 6).
- Part 2: All inclusion criteria in Part 1/MAD apply (participants will not be required to undergo Screening blood collections additional to those scheduled on Part 1/MAD Visit 6 [Day 253]).
Exclusion criteria 10
- Part 1: Confirmed (by repeat measurement) clinically significant vital sign or ECG abnormality at Screening including: a. Heart rate (HR) < 45 beats per minute b. QTcF > 450 milliseconds c. Blood pressure exceeding the 95th percentile for age, sex, and height plus 12 mmHg, or blood pressure meeting hypertension diagnostic criteria for children per European Society of Hypertension (ESH) guidelines for children and adolescents, or blood pressure > 140/90 mmHg d. Blood pressure below the 5th percentile for age, sex, and height per ESH guidelines for children and adolescents.
- Part 1: Documented diagnosis of severe MECP2 duplication including terminal duplication and/or translocation or MECP2 triplication OR clinical features associated with severe variant structure including (a) onset of seizures prior to aged 5 years (for those 5 years and above at signing of ICF), (b) oxygen dependence, and (c) microcephaly, IF MECP2 genetic structure information is unavailable.
- Part 1: Known brain or spinal disease that would interfere with the LP procedure, or CSF circulation or presence of other factors would affect the safety of the LP procedure.
- Part 1: Has any concomitant disease or condition or circumstance, or any finding at Screening that, in the opinion of the Investigator, makes the participant unsuitable for enrollment or that could interfere with the conduct of the study or that would pose an unacceptable risk to the participant in this study
- Part 1: Treatment with an investigational drug, biological agent, or device within 30 days of Screening, or 5 half-lives of investigational agent, whichever is longer.
- Part 1: Previous treatment with an oligonucleotide (including siRNA) within 4 months of Screening if single dose received, or within 12 months of Screening if multiple doses received (this exclusion does not apply to vaccines - both mRNA and viral vector vaccines are allowed including COVID-19). For centrally administered ASOs, a minimum of 12 months washout is required irrespective of the number of doses received.
- Part 1: Has experienced Status Epilepticus in the past 6 months.
- Part 1: Active infection requiring systemic antiviral or antimicrobial therapy that will not be completed prior to BL (Day 1).
- Part 1: Has a history of gene therapy or cell transplantation or any other experimental brain surgery.
- Part 2: Has developed any concomitant disease (e.g., gastrointestinal, renal, hepatic, endocrine, respiratory, or cardiovascular system disease) or condition or circumstance, or any finding during Part 1/MAD that, in the opinion of the Investigator, makes the participant unsuitable for continued treatment (e.g. could interfere with the conduct of the study or that would pose an unacceptable risk to the participant in this study).
Endpoints
Primary and secondary outcome measures (English text)
Primary endpoints 1
- Incidence of treatment-emergent adverse events (TEAEs) and clinically significant change from Baseline (BL) in vital signs, physical and neurological examination, laboratory assessments, and electrocardiogram (ECG) over the course of the study.
Secondary endpoints 2
- Maximum plasma concentration (Cmax), area under the concentration-time curve (AUC), elimination half-life (t½), and trough (pre-dose) and post-treatment ION440 concentrations, where appropriate
- ION440 trough (pre-dose) and post-treatment concentrations in CSF
Investigational products
Investigational medicinal products (IMPs), comparators, placebo, auxiliary
Test 1
Sponsors and contacts
Sponsor organisations, regulatory contacts, third parties
Ionis Pharmaceuticals Inc.
- Sponsor organisation
- Ionis Pharmaceuticals Inc.
- Address
- 2855 Gazelle Court
- City
- Carlsbad
- Postcode
- 92010-6670
- Country
- United States
Scientific contact point
- Organisation
- Ionis Pharmaceuticals Inc.
- Contact name
- Global Regulatory Affairs
Public contact point
- Organisation
- Ionis Pharmaceuticals Inc.
- Contact name
- Global Regulatory Affairs
Third parties 12
| Organisation | City, country | Duties |
|---|---|---|
| Clouds of Care ORG-100047172
|
Gent, Belgium | Other |
| Charles River Laboratories Edinburgh Limited ORG-100012600
|
Tranent, United Kingdom | Laboratory analysis |
| Sitero LLC ORG-100047455
|
Coral Gables, United States | Other, Code 5, Data management, E-data capture |
| Ionis Pharmaceuticals Inc. ORG-100006101
|
Carlsbad, United States | Laboratory analysis |
| Pyxant Labs Inc. ORG-100044673
|
Colorado Springs, United States | Laboratory analysis |
| Invicro LLC ORG-100046990
|
New Haven, United States | Other |
| Medpace Reference Laboratories LLC ORG-100041727
|
Cincinnati, United States | Other, Laboratory analysis, Code 5, Data management, E-data capture |
| Ambry Genetics Corp. ORG-100044727
|
Aliso Viejo, United States | Other |
| Icon Clinical Research Limited ORG-100008322
|
Dublin 18, Ireland | Code 8 |
| Propharma Group LLC ORG-100048652
|
Raleigh, United States | Other, Code 5 |
| Eresearchtechnology Inc. ORG-100013039
|
Philadelphia, United States | Code 14, Code 5, Data management, E-data capture |
| Chillibean Limited ORG-100042592
|
London, United Kingdom | Other, E-data capture |
Locations
3 EU/EEA countries · 3 investigational sites
By country
| Country | MS status | Planned subjects | Sites |
|---|---|---|---|
| Austria | Ongoing, recruiting | 4 | 1 |
| France | Ongoing, recruiting | 6 | 1 |
| Spain | Authorised, recruiting | 6 | 1 |
| Rest of world
United States, Canada, United Kingdom, Australia
|
— | 36 | — |
Investigational sites
Country notifications
Trial-start, recruitment-start, end and early-termination notifications submitted per Member State
| Country | Trial start | Trial end | Recruitment start | Recruitment end | Early termination |
|---|---|---|---|---|---|
| Austria | 2025-12-03 | 2025-12-10 | |||
| France | 2025-10-24 | 2025-12-15 | |||
| Spain | 2026-03-17 |
Results and documents
Annex IV summary of results, Annex V layperson summary, and all documents registered in CTIS for this trial
Documents 34 files
Public protocol annexes, IB summaries, regulatory submissions and post-authorisation documents registered in CTIS.
| Type | Title | Version |
|---|---|---|
| Protocol (for publication) | D1_Protocol 2023-507192-22_redacted | amendment6 |
| Recruitment arrangements (for publication) | K1_Recruitement arrangements | 1 |
| Recruitment arrangements (for publication) | K1_Recruitment arrangements | 2 |
| Recruitment arrangements (for publication) | K1_Recruitment arrangements_FR | 2 |
| Subject information and informed consent form (for publication) | ION440-CS1_ES_Future Research ICF_ES_Redacted | 1 |
| Subject information and informed consent form (for publication) | ION440-CS1_ES_Sub-Study 1 ICF Part 1_ES_Redacted | 2 |
| Subject information and informed consent form (for publication) | L1_ION440-CS1_AT_Site Contact Details_Austria | NA |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Archived Samples ICF_redacted | 2 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF LTE Part 2 | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF LTE Part 2_Redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF LTE Part 2_Redacted | 5 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF MAD Part 1 | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF MAD Part 1_Redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver ICF MAD Part 1_Redacted | 5 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver PIS LTE Part 2_redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Caregiver PIS MAD Part 1_redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_ICF LTE Part 2 | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_ICF MAD Part 1_redacted | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_ICF_Pregnant Partner_clean | 2 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Main ICF LTE Part 2_Redacted | 7 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Main ICF MAD Part 1_redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Parent ICF LTE Part 2_Redacted | 5 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Parent ICF MAD Part 1_redacted | 5 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_PIS LTE Part 2_redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_PIS_MAD Part 1_redacted | 8 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_PIS_Pregnant Partner_clean | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Sub-Study 1 ICF Part I _redacted | 3 |
| Subject information and informed consent form (for publication) | L1_SIS and ICF_Sub-Study 2 ICF Part I _clean | 3 |
| Subject information and informed consent form (for publication) | L2_Clincierge_Avis de protection des donnees | 1 |
| Subject information and informed consent form (for publication) | L2_Clincierge_PFD_Datenschutzhinweis | 1 |
| Synopsis of the protocol (for publication) | D1_Protocol synopsis 2023-507192-22_EN_redacted | amendment6 |
| Synopsis of the protocol (for publication) | D1_Protocol synopsis ES 2023-507192-22_ES_redacted | amendment6 |
| Synopsis of the protocol (for publication) | D1_Protocol synopsis FR 2023-507192-22_FR_redacted | amendment6 |
| Synopsis of the protocol (for publication) | D1_Protocol synopsis_AT_2023-507192-22_DE_Redacted | amendment6 |
Application history
8 submissions — initial application plus substantial / non-substantial modifications
| # | Type | Code | Submitted | Reference MS | Conclusion | Decision date |
|---|---|---|---|---|---|---|
| 1 | INITIAL | IN | 2024-04-04 | Spain | Acceptable with conditions 2024-07-22
|
2024-07-23 |
| 2 | SUBSTANTIAL MODIFICATION | SM-1 | 2024-12-16 | Spain | Acceptable 2025-02-10
|
2025-02-12 |
| 3 | SUBSEQUENT ADDITION OF MSC | APP-3 | 2025-04-17 | Acceptable 2025-02-10
|
2025-07-14 | |
| 4 | SUBSTANTIAL MODIFICATION | SM-2 | 2025-08-07 | Spain | Acceptable 2025-09-22
|
2025-09-23 |
| 5 | SUBSTANTIAL MODIFICATION | SM-3 | 2025-12-16 | Spain | Acceptable 2026-03-20
|
2026-03-20 |
| 6 | SUBSTANTIAL MODIFICATION | SM-4 | 2026-04-23 | Spain | Acceptable | 2026-06-01 |
| 7 | NON SUBSTANTIAL MODIFICATION | NSM-1 | 2026-06-03 | Spain | 2026-06-03 | |
| 8 | NON SUBSTANTIAL MODIFICATION | NSM-2 | 2026-06-03 | 2026-06-03 |